#!/bin/bash OUTDIR=/sequencelogic/SLSync/testdata/package/loan/classification for FART in /sequencelogic/SLSync/testdata/package/loan/frt/*.frt; do # [--out {outputpath}] --frt {frtfilepath} --libindex {libraryindexpath} fn=`basename ${FART} .frt` output="${OUTDIR}/${fn}.json" echo "Classify $FART to $output ..." /sequencelogic/bin/sequencelogic-run-classification.sh --out "$output" --frt "${FART}" --libindex "/sequencelogic/SLSync/config/libindex-standard-20160222134612.paths" done